{"id":228,"date":"2021-04-02T18:15:27","date_gmt":"2021-04-02T22:15:27","guid":{"rendered":"https:\/\/groups.chem.cmu.edu\/kietrys\/?page_id=228"},"modified":"2021-05-28T19:04:42","modified_gmt":"2021-05-28T23:04:42","slug":"useful-links","status":"publish","type":"page","link":"https:\/\/groups.chem.cmu.edu\/kietrys\/useful-links\/","title":{"rendered":"USEFUL LINKS"},"content":{"rendered":"

Prediction of RNA structure<\/h3>\t\t\t

RNAstructure<\/a><\/p>\n

ViennaRNA Web Services<\/a><\/p>\n

RNAComposer<\/a><\/p>\n

 <\/p>\n

 <\/p>\n

 <\/p>\n

 <\/p>\n<\/div>\n\t\t<\/div><\/div>

Circular RNA databases<\/h3>\t\t\t

CircBase<\/a><\/p>\n

CircFunBase<\/a><\/p>\n

CIRCpedia<\/a><\/p>\n

circRNADb<\/a><\/p>\n

CircR2Disease<\/a><\/p>\n

Circular RNA Interactom<\/a><\/p>\n

circATLAS<\/a><\/p>\n<\/div>\n\t\t<\/div><\/div><\/div>

Genome browsers, alignment and primer design<\/h3>\t\t\t

UCSC Genome Browser<\/a><\/p>\n

National Center for Biotechnology Information (NCBI)<\/a><\/p>\n

GeneCards<\/a><\/p>\n

Basic Local Alignment Search Tool (BLAST)<\/a><\/p>\n

Primer-BLAST<\/a><\/p>\n

Primer3web<\/a><\/p>\n

 <\/p>\n

 <\/p>\n

 <\/p>\n<\/div>\n\t\t<\/div><\/div>

RNA modifications<\/h3>\t\t\t

Modomics<\/a><\/p>\n

RNAMDB<\/a><\/p>\n

RMVar<\/a><\/p>\n

RMBase<\/a><\/p>\n

The RNA modification database<\/a><\/p>\n

RNAmod<\/a><\/p>\n

tRNAmod<\/a><\/p>\n

tRNAdb 2009<\/a><\/p>\n

 <\/p>\n

 <\/p>\n<\/div>\n\t\t<\/div><\/div><\/div>

Other databases<\/h3>\t\t\t

miRBase<\/a><\/p>\n

miRDB<\/a><\/p>\n

exoRBase<\/a><\/p>\n

Spectral Database for Organic Compounds<\/a><\/p>\n

e-EROS<\/a><\/b><\/b><\/p>\n

 <\/p>\n<\/div>\n\t\t<\/div><\/div>

Online biocalculators<\/h3>\t\t\t

Biomath Calculators<\/a><\/p>\n

Oligo Calc<\/a><\/p>\n

Reverse Complement<\/a><\/p>\n

The Exact Mass Calculator<\/a><\/p>\n

Biological Magnetic Resonance Data Bank<\/a><\/p>\n

 <\/p>\n<\/div>\n\t\t<\/div><\/div><\/div><\/div>","protected":false},"excerpt":{"rendered":"

RNAstructure ViennaRNA Web Services RNAComposer         CircBase CircFunBase CIRCpedia circRNADb CircR2Disease Circular RNA Interactom circATLAS UCSC Genome Browser National Center for Biotechnology Information (NCBI) GeneCards Basic Local Alignment Search Tool (BLAST) Primer-BLAST Primer3web       Modomics RNAMDB RMVar RMBase The RNA Continue Reading<\/a><\/span><\/p>\n","protected":false},"author":14,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-228","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/groups.chem.cmu.edu\/kietrys\/wp-json\/wp\/v2\/pages\/228","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/groups.chem.cmu.edu\/kietrys\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/groups.chem.cmu.edu\/kietrys\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/groups.chem.cmu.edu\/kietrys\/wp-json\/wp\/v2\/users\/14"}],"replies":[{"embeddable":true,"href":"https:\/\/groups.chem.cmu.edu\/kietrys\/wp-json\/wp\/v2\/comments?post=228"}],"version-history":[{"count":17,"href":"https:\/\/groups.chem.cmu.edu\/kietrys\/wp-json\/wp\/v2\/pages\/228\/revisions"}],"predecessor-version":[{"id":263,"href":"https:\/\/groups.chem.cmu.edu\/kietrys\/wp-json\/wp\/v2\/pages\/228\/revisions\/263"}],"wp:attachment":[{"href":"https:\/\/groups.chem.cmu.edu\/kietrys\/wp-json\/wp\/v2\/media?parent=228"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}